The invention provides an agricultural underground water management and control system, a manufacturing method and an agricultural underground water management and control method. The system is composed of an agricultural water management and control center, water sale mechanisms and farm irrigation machine rooms. The agricultural water management and control center is built according to an agricultural irrigation plan of one region and used for managing and controlling the whole underground water resources of one region, only one water sale mechanism is arranged for every administrative village, the farm irrigation machine rooms are built according to the agricultural irrigation plan of one region, are set according to the farm irrigation area and are connected with the agricultural underground water management and control center through GPRS communication antennas. Each farm irrigation machine room is composed of a water resource controller, a distribution board, the GPRS communication antenna, a flow meter, an exhaust valve, a check valve, a submerged pump, an underground water source well, a water taking pipeline, a water conveying pipeline, a water level sensor, a soil moisture sensor and a rainfall sensor. The agricultural underground water management and control system is scientific in design, reasonable in structure, low in cost and easy to manufacture, water resources are saved, land subsidence is inhibited, the ecological environment is improved, the ability to withstand natural disasters is improved for the agriculture, and the agriculture comprehensive production capacity is improved.