The invention provides a monitoring method of a photovoltaic power generation system and a system thereof. The method comprises the classified collection, classified storage, service provision and classification application. The classified collection comprises the real-time data collection, periodic data collection and the event data acquisition of equipment in a system. According to the data, the provided service comprises state management, equipment control, exclusive management, alarm recognition, task management and log management. The operated application comprises operation monitoring, remote control, alarm notification, video surveillance, analysis and diagnosis, comprehensive inquiry, statistical reporting and equipment management. According to the monitoring method and the system, the real-time monitoring and control of the main equipment in a solar photovoltaic power station is carried out, the operation of the power station is rapidly grasped through various styles of charts and data, the completely reliable and stable operation of a solar photovoltaic power generation system is ensured through a user-friendly interface, powerful analysis functions and perfect fault alarm, and remote off-site maintenance and multi-people cooperation are facilitated to realize secondary configuration development.