The invention relates to a method for preparing a Chinese herbal medicine nutritional fertilizer for Chinese wolfberry. The fertilizer consists of dry sheep manure, dry duck manure, dry chicken manure, sorghum cake powder, corn stem and leaf powder, loofah stem and leaf powder, barley straw powder, thatch powder, broad bean stem and leaf powder, potassium dihydrogen phosphate, bone powder, potassium sulfate, a zinc fertilizer, a potassium fertilizer, ammonium bicarbonate, a pesticide, carbendazim, rape seed cake powder and phenolic resin. By the nutritional fertilizer, the growth rate of the Chinese wolfberry is high, a leaf surface is thick and high in medicine content, fruits are heavy, yield is increased, the problem of repeated fertilization is solved, disease resistance is improved, and the defects that the leaves of the Chinese wolfberry wither and fall, a few flowers and fruits are generated, the root is small and undeveloped, the growth rate is low, and various diseases and pests are easily caused due to untimely fertilization are overcome.