The invention discloses a high speed rail braking method and a high speed rail braking system based on multiple intelligent bodies. The high speed rail braking method based on the multiple intelligent bodies includes the following step: step S110, using a braking device to receive external angle acceleration magnitude, and obtaining initial control parameter value according to a preset function relationship between the external angle acceleration magnitude and a control parameter value, and further includes the following steps: step S120, obtaining current angle acceleration magnitude of a plurality of wheel sets through detection; step S130, obtaining an actual control parameter value of each current wheel set according to a function relationship among the current angle acceleration magnitude, the current angle acceleration magnitude of two adjacent wheel sets, the external angle acceleration magnitude and the initial control parameter value of each current wheel set, which are preset; step S140, using the breaking device to brake the corresponding wheel sets according to the actual control parameter values, and returning to the step S110. The high speed rail braking method based on the multiple intelligent bodies can simultaneously consider influence factors between time delay constraint and each wheel set, and difference between braking effects of the high speed rail braking method based on the multiple intelligent bodies and expected braking effects is small, and furthermore braking accuracy is high.