The invention relates to a fragmenting system for a laminated PCB and a segmenting method of the fragmenting system. The fragmenting system is provided with a conveying correction device, a transversecutting positioning device, a transverse cutting device, a transverse cutting discharge device and a cutting suction plate transplanting device which are sequentially arranged in the transverse direction, as well as a transplanting discharge device, a longitudinal cutting positioning device, a longitudinal cutting device and a longitudinal cutting discharge device which are sequentially arrangedin the longitudinal direction, wherein the cutting suction plate transplanting device and the transplanting discharge device are perpendicular and mutually spliced. The segmenting system with high degree of automation is adopted to perform positioning correction, transverse positioning cutting, transplanting and longitudinal positioning cutting on the laminated PCB, and manual processing is not needed, so that the segmenting efficiency is higher, and the segmenting requirement of the laminated PCB is completely satisfied.