The invention discloses a parallel drug-target correlation prediction method based on sorting learning, and belongs to the field of bioinformatics. According to the method, multiple types of similarity, correlation characteristics, chemical spatial characteristics and gene spatial characteristics are extracted through multiple characteristic extraction methods; then, due to the fact that a characteristic set with high dimensionality can be obtained through multi-angle characteristic extraction and samples do not have conventional positive and negative example labels, dimensionality reduction processing is conducted through a principal component analysis method, then, the dimensionality reduced characteristic set is input into a sorting learning algorithm, and finally the drug-target correlation degree under each query can be predicted and output. By utilizing sorting learning, the drug-target correlation is no longer simply divided into correlation or uncorrelation, and sorting is performed according to the correlation degree of the drug and the target, so that research and development of a new drug are facilitated, and redirection of the drug is also facilitated.