The invention belongs to the technical field of
disease control in
aquaculture, and particularly relates to a
hippocampus enteritis pathogen separation and identification and medication
screening method based on a high-
throughput sequencing technology, which comprises the following steps: collecting intestinal tissues of a diseased
hippocampus and a healthy
hippocampus, respectively preparing
tissue homogenate, and freezing for preservation; the method comprises the following steps: extracting
DNA (
Deoxyribose Nucleic Acid) of microorganisms of an intestinal
tissue sample, performing 16SrDNA high-
throughput sequencing, analyzing intestinal
flora composition, and determining dominant
bacteria; selecting and screening a culture medium according to dominant
bacteria, and performing pathogenic bacterium separation and purification on intestinal tissues of the diseased hippocampus;
dNA of the purified strain is extracted, 16S rDNA amplification and sequencing are carried out, and the species of
pathogenic bacteria are identified through
sequence comparison; according to the method, the diversity and abundance differences of microorganisms in the sick hippocampus and the healthy hippocampus are compared through a high-
throughput sequencing technology, and targeted separation, identification and
drug sensitivity screening are further carried out by taking statistically
significant difference bacteria as the guidance of potential
pathogenic bacteria.