The invention discloses an auxiliary heating system in a liquid state heavy metal cooling natural circulating pool type reactor. The system comprises a gas storing tank, a filter, a gas heater, a fan, a gas input tube, an inner-layer thermal insulation plate, an outer-layer thermal insulation plate, a bottom heating ring, a gas output tube, a reactor core coolant entrance baffle, a pipeline fixing steel plate, and pipelines and valves connected between the devices. The system realizes the function of assisting in heating liquid state metal in a main vessel of the liquid state metal cooling pool type reactor, has a simple structure, is convenient to start, can build large-space natural circulation of the liquid state heavy metal in the main vessel even if the reactor is at low power or in shutdown condition after being put into operation, guarantees the temperature of the liquid state heavy metal to be above the melting point, and effectively improves the reliability and safety of the reactor.