The invention discloses a tipping bucket type mud-filling prevention recharging system applied to riverway. The tipping bucket type mud-filling prevention recharging system applied to the riverway comprises a recharging pond and a recharging well, the recharging pond is internally provided with reversed filter materials, the recharging pond is arranged on a riverway protection slope, the recharging well is formed in the lower part of the top of the slope, the recharging pond communicates with the recharging well through a recharging pipeline, and the recharging pipeline is provided with a valve, the valve is used for controlling on-off of the recharging pipeline, a water permeable cover plate is arranged on the recharging pond, a disturbance mechanism is arranged on the position, on the reversed filter materials, in the recharging pond, and the disturbance mechanism is used for local disturbance of water flow on the water permeable cover plate. According to the tipping bucket type mud-filling prevention recharging system applied to the riverway, mud-filling prevention can be effectively achieved, it is prevented that the reversed filter materials are washed away, the valve can be shut down in emergency when water quality pollution occurs, and polluted water recharging to an underground water aquifer is prevented.