The invention relates to a compound plant extract, a composition and a use method for controlling the growth of Cladophyllum, belonging to the technical field of seawater pond culture. The compound plant extract is liquid, and the components include thyme extract, perilla extract, Peppermint extract, eucalyptus leaf extract, clove extract, co-solvent and solubilizer, the composite plant extract is uniformly mixed with biochar, zeolite powder, bentonite, and starch to make granules. The method can not only effectively control the abnormal growth of Cladoella in mariculture ponds, but also improve and optimize the culture environment without affecting the growth of culture objects, and effectively solve the problems of environmental deterioration and secondary pollution caused by drug control of algae growth in the prior art.