The invention belongs to the technical field of distributed power generation microgrid systems in power systems and relates to a wind-solar-diesel storage isolated microgrid system which comprises a lead-acid battery, one group or multiple groups of photovoltaic battery arrays, a fan, a diesel generator, a microgrid monitoring sub-system, a controllable load and an uncontrollable load, wherein the fan comprises more than one wind turbine generator or more than one group of wind turbine generator set, the lead-acid battery and the photovoltaic battery arrays are merged into a direct current bus bar through all front-stage two-way DC (direct current)/DC converters and connected into an alternating current bus bar through a two-way DC/AC (alternating current) inverter, the diesel generator is merged into the direct current bus bar through an AC/DC current converter, the wind turbine generator set is connected into the alternating current bus bar through an AC/DC/AC converter, the microgrid monitoring sub-system is used for controlling voltage and the frequency in a microgrid to be stable. The invention simultaneously provides a coordinated operation control method for the system. Thewind-solar-diesel storage isolated microgrid system has stronger robustness and flexibility, and can meet the long-term high-efficient stable operation requirement of the isolated microgrid system.