The invention relates to a library establishment method for metagenome sequencing, a kit and a sequencing method. The library establishment method comprises the steps of fragmentation of a DNA template, PCR amplification, connector addition and the like. The primer application quantity of PCR amplification is 1.5-2.5 muL/50muL in system, the circulation number is 18-22, the annealing temperature is 50-60 DEG C, and DNA polymerase with non-biased GC is selected. According to the method, by optimizing a library establishment system, the initial number of library establishment DNA templates is lowered, the library establishment success rate is increased, the PCR amplification bias is lowered, and the technical problems are solved that for an existing library establishment method, the demand for the initial number of the DNA templates is high, the amplification bias easily occurs, and the strain abundance is severely out-of-balance. The method is more beneficial to precise detection of themetagenome.