The invention discloses a CVD diamond grinding wheel with an ordered micro-structured surface and a making method thereof. The grinding wheel is characterized in that a layer of diamond film is deposited on the outer circumferential face of a grinding wheel hub, a large number of staggered in-order micro grinding units are machined on the whole outer circumferential face of the diamond film, and the top ends of the grinding units are in kidney shapes. The making method is characterized in that through the chemical vapor deposition that is CVD, the diamond film is deposited on the outer circumference face of the grinding wheel hub, a pulse laser beam is adopted to machine the large number of micro grooves with the same geometric dimensioning in the outer circumference face of the whole diamond film, and the large number of micro grinding units are formed; the grinding units are arranged in a staggered and in-order manner, the top face of each grinding unit is in a kidney shape, according to the grinding wheel, the effective sharpening number of the grinding wheel during grinding can be improved, the chip formation efficiency and the surface material removal rate are improved, the cutting performance is improved, the surface machining quality and the cutting efficiency can be improved, the holding force of the grinding wheel hub to the grinding units can be increased, and the service life of the grinding wheel can be obviously prolonged.