The invention provides an electrochemical detection method through partial morphology scanning by using an electrochemical detection device. The method comprises the following steps: performing rapid and long-distance control on a probe through a three-dimensional stepper motor, performing short-distance precise control through a piezoelectric ceramic sensor, keeping constant potential on a tested sample through a double-constant potential rectifier, meanwhile externally exerting an alternating current potential signal onto the testing probe, acquiring imaging information of three-dimensional spatial distribution of the electrochemical signal such as real part Zre, imaginary part -Zim, an absolute module value Z and a phase angle -Phase of a sample partial area through a data acquisition module, and acquiring element parameter information of an equivalent circuit. By adopting the method, the defects that a conventional scanning electrochemical microscope is weak in signal, hard in obtaining a feedback current density signal, single in detection signal and the like are overcome, partial microcosmic impedance distribution characteristics of the surface of a sample can be obtained, the information is rich, and the real characteristics of the sample can be studied and analyzed.