The invention relates to a geophysical prospecting two-dimensional electrical sounding data chromatography inversion processing technology and belongs to the technical field of geological exploration. Under the conditions of the same geoelectricity situation and the same polar distance, underground half-space current lines have the consistent distribution form, for a primary electric field, with the change of a supply current, the electric field strength and the current line density at each position under the ground are changed, but the relative ratio of the electric field strengths or the current line densities between points is not changed; and for a secondary electric field, when the excitation reaches a saturated state, attenuation curve characters are approximate. Different resistivity and polarizability properties are effectively distinguished; the theoretical formula derivation is carried out; sounding data layer-by-layer stripping coefficients of adjacent polar distances are solved; an inversion mathematical model is constructed; and the imitative resistivities, polarizabilities and corresponding depths are obtained. Due to the adoption of the chromatography processing, the influence of topographic relief can be inhibited, the resolution is improved, the multiplicity is reduced, the inversion efficiency is greatly improved, and a result is very close to the real geological condition. The geophysical prospecting two-dimensional electrical sounding data chromatography inversion processing technology is mainly applied to geophysical prospecting data processing interpretation in the field of geological exploration such as exploration of mineral resources, engineering geologic structures, exploration of water resources and the like.