The invention discloses a hydraulic screw ship cabin bottom cleaning machine and an application method thereof, and belongs to the technical field of crushing and transportation of mineral aggregates. The equipment comprises a host machine; the host machine is a loader, a scraper or an excavator, and is provided with a bucket; the bucket is provided with a hydraulic crushing device; the hydraulic crushing device comprises a rotating shaft and a hydraulic motor; the rotating shaft is arranged in the bucket, and is provided with a crushing blade; and the hydraulic motor is arranged on the outer side surface of the bucket, and drives the rotating shaft to rotate. The equipment integrates crushing and loading , can crush and clean mineral aggregates bonded at the bottom of a ship cabin, is simple and compact in structure, high in working efficiency, excellent in effect, free of dead angles and capable of continuously operating, needs no laborers to perform crushing operation, largely reduces the labor capacity, decreases the labor cost, and prevents the generation of accidents; and in addition, the crushing operation poses no damage to a ship body, so that the service lifetime of a ship is prolonged.