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64 results about "Dna storage" patented technology

DNA storage is the process of encoding and decoding binary data onto and from synthesized strands of DNA (deoxyribonucleic acid). In nature, DNA molecules contain genetic blueprints for living cells and organisms.

Encoding method and decoding method for performing information storage by means of DNA

InactiveCN105022935ACoding method is simple and easyConsider efficiencySpecial data processing applicationsDecoding methodsMagnetic media
The present invention relates to an encoding method and an decoding method for performing information storage by means of DNA. Different from a conventional computer magnetic medium, an information write-in mode of DNA storage is that after information is encoded, an oligonucleotide chain with a certain length is synthesized by utilizing an oligonucleotide chain synthesis technology and the synthesized oligonucleotide chain is stored in a powder form; and a reading technology of DNA storage is that the oligonucleotide chain is sequenced by utilizing a high-throughput sequencing technology and after being spliced, sequenced fragments are transcoded, so that an initial computer multimedia file can be restored. Due to the characteristics of the DNA oligonucleotide chain, in the design of an encoding mode, a random error possibly existing in the DNA synthesis and sequencing process can be taken into full consideration, and error authentication and multiple cover segment are performed on the DNA fragments. The encoding method for a DNA storage technology, which is constructed by the present invention, is simple, convenient and easy to operate and can be applied to transform the computer multimedia files in various formats into DNA sequences so as to perform information storage.
Owner:QINGDAO INST OF BIOENERGY & BIOPROCESS TECH CHINESE ACADEMY OF SCI

DNA storage, encryption and encoding method

The invention discloses a DNA storage, encryption and encoding method. The method comprises the following steps of: inputting original data to perform binary conversion, performing Huffman encoding compression, and converting the input original data into a DNA sequence according to a DNA storage quaternary model; selecting a file as a secret key to carry out binary conversion, and then convertingthe file into a DNA sequence; encrypting a storage sequence by adopting a secret key; dividing the storage sequence into a plurality of columns with an equal length, and adding an address code to thehead of each column; adopting rS coding to correct each column, wherein the decoding process is a reverse process of coding, splicing is carried out according to address codes, and the address codes and error correction codes are deleted; decrypting the storage sequence according to the encryption method and the key sequence; and carrying out Huffman decoding to obtain the input file again. According to the method, encryption is carried out on the basis of the DNA quaternary model, the storage confidentiality is improved, extremely high coding potential is obtained, GC percentage and average content balance of basic groups G and C can be better controlled, synthesis is facilitated, and the error rate is low.
Owner:SOUTHEAST UNIV

DNA storage method and system and storage medium

The invention discloses a DNA storage method and system and a storage medium, and the method comprises the steps of carrying out the sequencing of synthetic DNA, and obtaining a plurality of sequencing sequences; determining that no corresponding sequencing base sequence exists in the coding table, and obtaining the base sequence with the smallest Hamming distance from the sequencing base sequencein the coding table to replace the sequencing base sequence; decoding the replaced sequencing sequence according to the coding table to obtain a decoded text, wherein the Hamming distance between anytwo base sequences in the character coding table is greater than a first threshold value. According to the embodiment of the invention, error correction is carried out on the sequencing base sequenceobtained by sequencing by utilizing the Hamming distance with the base sequence, and the sequencing base sequence after error correction is decoded to obtain a decoded text. Due to the fact that theHamming distance between any two base sequences in the coding table is larger than the first threshold value, the coding table has certain error correction capacity, and compared with existing redundant code error correction, the DNA storage efficiency is greatly improved. The invention can be widely applied to the field of molecular biology.
Owner:GUANGZHOU UNIVERSITY

DNA storage hierarchical representation and interleaved coding method capable of containing artificial bases

The invention discloses a DNA storage hierarchical representation and interleaved coding method capable of containing artificial bases. The invention belongs to the field of DNA storage reliable coding, binary data is scrambled, error correction codes are grouped and then divided into a plurality of sub-blocks, different coding sub-blocks form oligonucleotide molecules according to a layering mode, and when the molecules are lost or basic groups have errors, the errors can be dispersed to a plurality of error correction codes for error correction; the bipartite graph with the big girth is adopted to realize the correspondence of layering and block codes, so that very many oligonucleotide molecules can form a whole, and the error correction capability and the DNA storage reliability are improved. Furthermore, the artificial base pairs are included, the storage capacity of a single base is increased, each molecule can be decomposed into more layers, and the error correction performance and the storage efficiency are improved. The method has the advantages that artificial bases can be contained, so that the storage density of single bases is improved; the storage reliability is ensured through layering and bipartite graph-based interleaving; the invention provides a high-reliability and high-density DNA storage coding method.
Owner:TIANJIN UNIV

Kit for extracting stable bacterial genome DNA by paramagnetic particle method and extraction method thereof

The invention provides a kit for extracting stable bacterial genome DNA by a paramagnetic particle method and an extraction method thereof. The kit comprises a lysis reagent group for lysing and releasing bacterial genome DNA and an extraction reagent group for extracting the genome DNA, wherein the lysis reagent group consists of a buffer solution and a lysis solution; the extraction reagent group consists of a paramagnetic particle binding solution, a washing solution and an eluent; and the paramagnetic particle binding solution consists of sodium salt sodium citrate or sodium acetate, a reducing agent dithiothreitol, guanidine hydrochloride and a paramagnetic particle suspension. The raw materials are reasonably compounded to obtain the optimal proportion and the combined extraction conditions of a paramagnetic particle binding solution compounding system, and the extraction method is optimized, so that the extracted bacterial genome DNA has high purity and complete fragments, is difficult to degrade, has stability far superior to that of the commercially available kit, and has remarkable advantages in subsequent experiments such as DNA storage, hybridization, PCR and the like; and meanwhile, the reagents are nontoxic and have small environmental pollution.
Owner:WUHAN TEXTILE UNIV
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