The invention discloses an animal single
cell data
cell type
annotation method, which is characterized by comprising the following steps: collecting Bulk
RNA-seq data of purified
cell types in various tissues and organs of a specific animal, and integrating the Bulk
RNA-seq data into a reference
data set after preprocessing; the method comprises the following steps: acquiring single-cell
RNA-seq
original data, screening the single-cell RNA-seq
original data to obtain high-quality cells, screening high-variation genes from the high-quality cells,
processing the high-variation genes, extracting principal components, performing
dimensionality reduction on the principal components, and performing
cell clustering based on a
dimensionality reduction result to obtain cell clusters; and calculating expression similarity between the cell clusters and the reference
data set based on the high-variation genes, determining
initial cell types of the cell clusters according to a similarity result, and carrying out iterative tuning on the
initial cell types with similar scores to obtain a final
cell type annotation result. The method provides efficient and accurate
technical support for animal single cell research.