The invention provides a continuous hot galvanizing process of an ultra-thin galvanized substrate for color coating, which is characterized in that according to bottleneck links of production and quality of the ultra-thin galvanized substrate (less than or equal to 0.3 mm) for color coating, a process of welding, annealing, galvanizing, finishing, withdrawing and straightening and curling is formulated; the production, surface and appearance quality problems of poor welding, wrinkles, wave shapes, strip breakage and the like of ultra-thin specifications are effectively controlled, and the product quality is greatly improved. Through effective cooperation of tension of all sections, accidents such as deviation, narrowing and breakage of the ultra-thin steel strip are effectively eradicated, and the high-speed and constant-speed production stability of the ultra-thin steel strip is ensured. An incomplete low-temperature annealing process is adopted, the annealed structure is a semi-fibrous structure, and the hardness, the strength and the toughness meet the use requirements of customers on strength improvement and thinning of the color-coated sheet.