The invention relates to a hydrogen circulation system of a fuel cell system, which comprises a hydrogen source, a valve group, a vortex tube, a first ejector, a second ejector and a gas-water separator, the output end of the hydrogen source is connected to the input end of the vortex tube through the valve group, and the cold end outlet of the vortex tube is connected to the jet inlet of the first ejector. The hot end outlet is connected to the jet flow inlet of the second ejector, the drainage inlet of the first ejector is connected to the hydrogen outlet of the fuel cell, the outlet of the first ejector is connected to the inlet of the gas-water separator, the gas outlet of the gas-water separator is connected to the drainage inlet of the second ejector, and the outlet of the second ejector is connected to the hydrogen inlet of the fuel cell. Compared with the prior art, the water environment of the anode side of the fuel cell can be improved, the performance of the fuel cell is improved, the service life of the fuel cell is prolonged, the control of a hydrogen circulation system is simplified, the operation reliability is improved, the size is reduced, and the power density of the fuel cell system is improved.