The Quantum Matrix system is a multi-dimensional, multi-threaded exchange environment for data organization, management, and manipulation. Data is organized into a multi-dimensional structure of nodes. Nodes may represent data, absence of data, or another set of nodes. The multi-dimensional structure or portions of it can be automatically created from a file system. One or more associations are also defined for the multi-dimensional structure. An association indicates a relationship between a node and another node, data, or a set of nodes. The multi-dimensional structure is then displayed three-dimensionally and navigated. Relational logic, Boolean algebra, or a scripting language can be applied to the nodes, data, and associations to produce a resultant set of nodes. Furthermore, portions of the multi-dimensional structure can be isolated with the use of planes to ease navigation. Furthermore, the Quantum Matrix system may have a client-server architecture, with the client running on a mobile device.