Protein composites of human body cell mesosomem its separation and use are disclosed. The composites consist of at least 129 proteins: 30 cell skeleton proteins, 4 centrosome proteins, 6 vesicular transport related proteins, 6 chromosome regulatory proteins, 2 motor proteins, 3 check point proteins, 7 degradable regulatory proteins, 9 membrane proteins, 12 transcriptional and translational related proteins, 28 protein kinases, 5 mitochondria proteins, 9 molecular chaperone proteins and 7 missing proteins. The process is carried out by culturing, synchronizing and collecting for human body cell, adding hypotonic solution, re-suspending, incubating and expanding collected cell, breaking expanded cell, taking out supernatant, centrifugal separating from density gradient, extracting and purifying protein composite from decontaminate, and separation identifying mesosome protein type. It supplies a pattern system and target protein ezrin and target site.