The invention discloses a method for processing velvet antler enzyme, which relates to a method for processing enzymes, and substantially solves the problem that existing enzymes lack animal enzymes and the like. The velvet antler enzymes comprise raw materials with parts by weight: antler powder 5 parts, Chinese wolfberry buds 10 parts, pineapples 10 parts, Chinese quinces 10 parts, mulberries 5 parts, carrots 5 parts, banana 5 parts, mangos 5 parts, rock candies 5 parts and grapes 40 parts. The method for processing the velvet antler enzyme comprises steps: the Chinese wolfberry buds are paved on a bottle bottom, carrot cubes and Chinese quince cubes are covered, the antler powder is scattered, and the banana, mango mixture and pineapple juice are poured to seal and stir, and are statically placed to ferment, enzyme stock solution which is centrifuged in a centrifugal machine is converted into a novel container, and residues are reserved. The rock candies is ground into candy powder, the grapes and the candy powder are commonly placed into enzyme residues after the grapes are broken, are added with saccharomycetes to ferment, seal and filter, and then residues are discharged. The enzyme stock solution which is fermented in a first segment and grape enzymes which are brewed in a second segment are mixed, and are filtered after maturing. The method for processing the velvet antler enzyme has the advantages that the enzymes contain the animal enzymes.