The invention discloses a method as well as a
molecular marker and a primer for identifying a rice male
sterility type and a three-line
hybrid rice type, belonging to the field of
molecular marker detection. Sequences of the
molecular marker and the primer for identifying the rice
cytoplasmic male sterility type and the three-line
hybrid rice type are shown as SEQ ID NO.1-36. The identification method disclosed by the invention comprises the steps of extracting the total
DNA (
Deoxyribose Nucleic Acid) of a rice material; by taking the extracted total
DNA as a template, using the primer for PCR (
Polymerase Chain Reaction) amplification; analyzing PCR amplification results, if amplification banding patterns of two materials are completely consistent, the two materials have the same
cytoplasm karyotype, namely have the same female parent source, otherwise, the two materials have different
cytoplasm karyotypes, namely have different female parent sources. The method as well as the molecular marker and the primer for identifying the rice male
sterility type and the three-line
hybrid rice type are easy and convenient to operate, stable and reliable, can be used for identifying cytoplasmic male sterile lines and three-line hybrid rice varieties, have the characteristics of accuracy, high efficiency and rapidness, and thus improve the identification efficiency of the sterile lines and new varieties.