The invention discloses a fluorescence quantitative PCR kit for detecting type-3 cow adenovirus and application. The kit comprises a) DNA extraction reagent, b) hot starting Taq DNA polymerase, c) primers and TaqMan probe, d) standard positive DNA template, and e) PCR fluorescence quantitative reaction liquid. The kit is characterized in that the sequence of a positive primer is 5'-CCTGAATTCTCTTGCAGCCAGA-3', the sequence of a negative primer is 5'-CCTACCGAACCGACGCAGAT-3', the size of an amplicon is 100bp, the sequence of a fluorescence probe is 5'-FAM-TGAGAAGGTACTCCTCGTCGCTGGACCA-TAMRA-3', a 5' end of the probe marks a fluorescence emitting group FAM, a near 3' end of the probe marks a fluorescence quenching group TAMRA, the standard positive DNA template converts colon bacillus DH5a by a pGEM-T carrier inserted into a type-3 adenovirus pol protein 100bp fragment, plasmids are extracted after multiplication to prepare the kit, and A260 is measured by an ultraviolet spectrophotometer to definite quantity and is diluted by 10 times of gradient. The kit efficiently and conveniently monitors type-3 cow adenovirus pollution in a serum product in real time, can be widely applied to epidemiology research on adenovirus infection, can provide technical support for related basic research, and has wide application prospect.