The invention relates to an electronic beam welding method of a sealing thin-wall aluminium alloy frame, which comprises the following steps that: a, before a cover board and the upper opening of a cavity are welded, a circular table is firstly added around the opening of the cavity, and the cover board is assembled in the circuit table in an interference fit way; b, during welding, welding parameters are adjusted, then, positioned welding of positioned welding points is carried out along the interval of 5-10mm of a welding seam, during the positioned welding, the mode of firstly temporarily welding shot welding seams and then temporarily welding long welding seams is taken as a principle; and c, during electronic beam welding, a circle of welding is carried out clockwise or anticlockwise along the welding seams from the positioned welding points of a short side, and scanning welding is added in the electronic beam welding parameters, the welding seams which are subject to butt welding are subject to secondary modified welding so as to reduce welding defects. The invention has the beneficial effects that the purposes of reducing welding deformation quantity and shortening following mechanical processing time are realized; and by carrying out modified welding to the welding area, the quality of the welding seams is improved, the intergranular structure of the heat influence area is improved, the skeleton strength of the sealing thin-wall aluminium alloy frame is ensured, and the production efficiency is greatly improved.