The invention provides a fluorine-containing wastewater treatment method, which comprises the following steps of: detecting pH value of the fluorine-containing wastewater; adjusting the adding amount of alkali or acid solution according to the pH value detection result to control the pH value of the fluorine-containing wastewater; detecting fluorine ion concentration of the fluorine-containing wastewater, and determining the adding amount of a calcium salt according to the result; delivering the fluorine-containing wastewater to a first reaction tank and a second reaction tank in turn, stirring the wastewater and performing full mixing reaction; delivering the treated wastewater to a third reaction tank, stirring the wastewater, adding coagulant into the wastewater to generate flocculation reaction to realize solid-liquid separation, and separating calcium fluoride from the wastewater; delivering the treated wastewater to a fourth reaction tank, stirring the wastewater, and adding coagulant aid to improve the settling effect; and finally, delivering the treated wastewater into a settling tank, discharging clear solution, and filter-pressing silt into mud cakes. The fluorine-containing wastewater treatment method provided by the invention has ideal treatment effect, meanwhile saves the consumption of chemicals, and reduces the treatment cost.