The invention discloses a preparation method of quercetin-3-O-β-D-glucuronic acid. It extracts the traditional Chinese medicine barley as a raw material, and the obtained extract is filtered and concentrated, and the ethanol content is adjusted to 40 ~80%, remove impurities, concentrate the supernatant to dryness, dissolve in methanol-water, reverse phase column chromatography, elute with 20-70% methanol, detect by thin chromatography, recrystallize and depigment the fraction containing the target stream, After drying, the pure quercetin-3-O-β-D-glucuronic acid with a purity greater than 99% can be obtained in batches. The invention has the advantages of less consumption of organic solvent, low toxicity, simple operation, low cost, and easy laboratory small-scale preparation and pilot production.