The invention belongs to the field of marine biology application, particularly relates to the field of shellfish molecular genetic breeding, and relates to an electrotransfection bivalve shellfish gene editing method, the concentration of recombinant plasmids is kept to be greater than or equal to 2 mu g/mu l, sgRNA and Cas9 protein are mixed into RNP (sgRNA and Cas9 protein complex) according to the volume ratio of 2: 1, the working concentration of the sgRNA is greater than or equal to 50 ng/mu l, the working concentration of the Cas9 is greater than or equal to 250 ng/mu l, the working concentration of the sgRNA is greater than or equal to 50 ng/mu l, and the working concentration of the Cas9 is greater than or equal to 250 ng/mu l; an electrotransfection method is applied to bivalve mollusk gene editing, the electric pulse condition is that the pulse interval is 1s, the number of pulses is 2, the electrode distance is 4mm, pulse voltage and pulse time are changed, the pulse voltage range is 50V-500V, and the pulse time is 100 microseconds-1ms. The method disclosed by the invention can provide a basis for bivalve gene function verification and gene breeding application, and has the advantages of simplicity in operation, low cost, easiness in popularization and the like.