The invention discloses an integrated control system of a pure battery power ship. The integrated control system comprises a power system, a power distribution system, a propelling system and an intelligent auxiliary driving system, the power system comprises a container, lithium batteries, a battery management system, an illumination system and a monitoring system, the lithium batteries, the battery management system, the illumination system and the monitoring system are arranged in the container, and multiple lithium batteries are arranged in parallel. The number of lithium battery packs in parallel operation can be conveniently selected according to actual power requirements, the flexibility is high, the monitoring system comprises a thermal control system, a combustible gas detection system, a fire fighting system and a fire alarm system, and the thermal control system, the combustible gas detection system and the fire fighting system are electrically connected with the fire alarm system. The internal condition of the power system can be detected in time, automatic troubleshooting can be conducted, the power distribution system is arranged in the power distribution cabin, the propelling system is arranged in a propelling cabin, the intelligent auxiliary driving system comprises an edge computing unit, a display screen and a data acquisition system, stability and reliability are achieved, and the safety of the ship is improved.