The invention relates to a rare species DNA information acquiring method, and belongs to the technical field of measuring or detecting methods containing enzyme or microorganisms. The method comprisesthe following steps: after acquiring a tissue of a south China tiger, purifying DNA, and enabling the DNA to generate random fragmentation, separating the DNA, and recovering, performing a A-adding catalytic reaction on the recovered DNA, and performing a coupled reaction on a T-carrier, performing conversion on a coupled product, screening a positive bacterial colony, culturing overnight, performing plasmid recovery, sequencing, and performing a specific primer design, synthetizing, and implementing PCR again and sequencing a PCR product, performing comparison with a sequence used in the primer design, if a result is consistent, it is demonstrated that the DNA fragment is the DNA of the target species surely. The method is used for acquiring DNA information of the rare species, and has the advantages of simple and convenient operation, high acquiring rate, low cost and the like.