The invention relates to a waterproof coding device having a built-in magnet disc. The waterproof coding device having the built-in magnet disc comprises the magnet disc, a turn button with a shaft, an induction circuit board, a positioning shaft, and a circular support seat, wherein an inner top face of the turn button is provided with an elastic positioning sheet, a port portion of an annular chamber at an outer wall of the turn button is provided with a magnetic guide ring, the magnet disc is mounted at a central portion of the positioning shaft, the induction circuit board is fixed at a tail portion of the positioning shaft, an outer circumferential wall of the circular support seat is provided with a positioning groove, a central portion of the circular support seat is provided with a shaft sleeve, the circular support seat is on a panel, a head portion of the positioning shaft penetrates through a mounting hole of the panel, thread connection with the positioning shaft is realized through a screw, the turn button is mounted on the support seat, the shaft is in moving matching with the shaft sleeve in the support seat, and the magnetic guide ring is attracted by a magnet of the magnet disc to realize synchronous rotation of the magnet disc and the turn button. The magnet disc is arranged in the casing panel, axial positioning of the turn button is realized through magnetic force of the magnet disc, the waterproof coding device has advantages of compact structure, waterproof performance, anti-shock performance and low cost and is especially applicable to use in a high wet environment or an easy shocking occasion.