The invention provides a residual heat utilization system of a fuel cell and a control method. The residual heat utilization system of the fuel cell comprises a controller, a first pipeline, a first temperature sensor, a water pump, a first three-way valve, a second three-way valve, a second pipeline, a third three-way valve, a third pipeline, a second temperature sensor, a fourth three-way valve, a fourth pipeline, a heat sink and a warm wind collection device, wherein a first end of the first pipeline is connected with an electric stack of the fuel cell, the first temperature sensor and the water pump are arranged on the first pipeline, the second temperature sensor is arranged on the third pipeline, a first end of the fourth three-way valve is connected with the electric stack of the fuel cell by the fifth pipeline, the heat sink is arranged on the fourth pipeline, and the warm wind collection device comprises an electric heater PTC (Positive Temperature Coefficient) group and a heat exchanger arranged on the third pipeline. With the residual heat utilization system of the fuel cell and the control method, provided by the embodiment of the invention, the working temperature of the electric stack of the fuel cell is ensured, residual heat generated by reaction of the electric stack of the fuel cell is effectively used for warm wind heat supply in a compartment, and the residual heat utilization system is energy-saving and environmental-friendly, is simple in structure and low in limitation of a applicable region.