The invention discloses a method and system for comprehensively monitoring and tracing the ring spinning yarn quality. Before doffing, the information, including the machine number, the ingot number,parameters of adopted rough yarn, the variety of spun yarn, the production date of the spun yarn, spinning temperature and humidity, draft multiple distribution and draft pressurizing parameters, of aspinning machine are written to a radio frequency identification tag of a corresponding spun yarn tube through a radio frequency identification reader-writer; when bobbin yarn enters a doffing station, the radio frequency identification reader-writer reads the information in radio frequency identification tags of all spun yarn tubes, then makes the information matched with the quality characteristic indexes including evenness, slugs, snicks, neps and hairiness, detected by an electronic yarn clearer on a yarn channel, of the bobbin yarn corresponding to the spun yarn tubes one by one, and reports the information to an upper computer, and finally, the analysis and tracing of the yarn forming quality of all spindles are achieved through a data analysis system of the upper computer. By meansof the method, the spinning quality levels of all spinning machines are improved, poor spindles in all the spindles are pointed out, and the quality monitoring of all the spindles is achieved.