The invention belongs to the technical field of medicines, and discloses a natural antibacterial and antiviral preparation, and a preparation method and application thereof, the preparation method ofthe preparation comprises the following steps: 1) screening grapefruit seeds, crushing the grapefruit seeds to a certain particle size, adopting ethanol as an extracting agent, extracting in a stirring manner to obtain a crude extract, and filtering the crude extract to obtain a filtrate; recovering ethanol to obtain an extracting solution; and 2) adding glycerin into the extracting solution in the step 1), adding water for diluting by a certain multiple to obtain a diluent, and adding citric acid, sodium citrate and a compound biological enzyme into the diluent to obtain a mixed solution. According to the preparation disclosed by the invention, all the components cooperate with one another, firstly, capsules of the preparation are rapidly dissolved, then, cell dissolution is further promoted, pear fire blight germs are effectively inhibited, and meanwhile, the preparation can rapidly take effect on common bacteria and has a broad-spectrum antibacterial effect.