The invention discloses a combined method for recycling flue gas desulfurization and fuel gas deamination pollutants and treating waste by using waste, and the method is a process technology of low-cost high-efficiency resource utilization technology of harmful substances in gas. According to the method, magnesium oxide is used as a medium, hydrolyzed magnesium hydroxide absorbs SO2 in various flue gases to generate magnesium sulfite, the magnesium sulfite is oxidized to generate magnesium sulfate, and then the magnesium sulfate is used for removing ammonia in coke oven gas or other fuel gases. The method provided by the invention comprises two specific process routes; firstly, the magnesium hydroxide obtained by reduction regeneration can be recycled for removing SO2 in the flue gas again; and secondly, the high-purity magnesium hydroxide is sold as a product, and magnesium-containing minerals such as calcined dolomite, serpentine and the like can be used instead in regions lack of magnesium oxide resources. The process can be used to purify magnesium hydroxide, and benefits can be better. According to the method provided by the invention, material consumption for flue gas desulfurization and coal gas deamination can be reduced to the minimum simultaneously, and corrosivity of magnesium sulfate is far lower than corrosivity of dilute sulfuric acid, so that the service life ofequipment is greatly prolonged.