The invention discloses a bacillus subtilis controlled release agent. The bacillus subtilis controlled release agent is prepared from, by mass, 1-5 parts of a carrier, 5-10 parts of a capsule wall material and 10-20 parts of bacillus subtilis fermentation broth. A preparing method of the bacillus subtilis controlled release agent includes the steps of firstly, culturing bacillus subtilis; secondly, preparing the capsule wall material; thirdly, adsorbing the bacillus subtilis or the bacillus subtilis fermentation broth through the carrier; fourthly, conducting spray-drying. By means of the technical scheme, the bacillus subtilis controlled release agent has the advantages that the bacillus subtilis and fermentation products thereof are microencapsulated to keep good vigor and stability, living microorganisms or microorganism metabolites are fixed to the carrier to keep the activity in use within the limited regional space through a physical method, and the product has the good microcapsule structure, has good mechanical strength and flexibility, and has the good controlled release effect on a capsule-core microbial agent.