The invention discloses a CMOS integrated process BJT structure, which comprises: P wells and N wells arranged side by side on a silicon substrate, a first shallow trench isolation is formed at the boundary between the P well and N well, and a first shallow trench isolation is formed in the P well. Two shallow trench isolations, a first P+ doped region is formed in the P well between the first and second shallow trench isolations, and a first N+ doped region is formed in the N well next to the first shallow trench isolation , a second N+ doped region is formed in the P well on the other side of the second shallow trench isolation, and a parallel first electrode and a metal silicide barrier layer are formed on the second N+ doped region, and the first P+ doped region A second electrode is formed on the first N+ doped region, and a third electrode is formed on the first N+ doped region; before the source-drain region ion implantation process, a flat layer is deposited, source-drain region ion implantation is performed, a metal silicide barrier layer is deposited, and metal silicide is performed. The blocking layer is etched to form the first electrode to the third electrode. The invention also discloses a BJT manufacturing method of CMOS integration technology. The invention can improve the uniformity of the current gain of the transistor, and can realize precise adjustment of the current gain.