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41 results about "Genetic screening method" patented technology

A high-throughput functional gene screening method and system for cell phenotypic image quantitative analysis

The invention discloses a high-throughput functional gene screening method and system for cell phenotypic image quantitative analysis, and belongs to the technical field of gene screening. The methodcomprises the steps of using a full-automatic fluorescence microscope to shoot a cell image of the phenotype to be screened and a cell image without the phenotype to be screened; respectively converting the images into a to-be-screened phenotype and a black-white binary image without the to-be-screened phenotype; then segmenting into an image containing a single phenotypic cell to be screened andan image containing a single phenotypic cell without being screened; taking the corresponding part of the image containing the single to-be-screened phenotypic cell in the cell image of the to-be-screened phenotypic cell as a positive training set, and taking the corresponding part of the image containing the single to-be-screened phenotypic cell in the cell image of the to-be-screened phenotypiccell as a negative training set to obtain a final model capable of identifying the cell phenotypic; and carrying out final model identification on the image of the knockout or overexpression cell of the to-be-screened gene to obtain the relevance between the to-be-screened gene and the phenotype. The method improves the screening efficiency and accuracy.
Owner:HUAZHONG UNIV OF SCI & TECH

Reference gene screening method for stable expression of suaeda salsa under salt stress

The invention discloses a reference gene screening method for stable expression of suaeda salsa under salt stress. According to transcriptome analysis results obtained in a laboratory and reported reference gene sequence information of other plants, fourteen reference gene candidates with relatively stable expression are preliminarily screened and named as ACT7, ACT1, CCD1, TUA5, UPL1, UBC28, EF1alpha, PP2A, DREB1D, TIM, V-H(+)-ATPase, MPK6, PHT4:5 and CESA1 respectively. For these gene candidates, corresponding amplification primers are designed and reference gene screening is conducted. Tengenes stably expressed in a gene expression profile of suaeda salsa are screened out as the reference genes of suaeda salsa under salt stress, and the stability and reliability of suaeda salsa gene expression analysis and research under salt stress conditions are easily improved. The method makes up for the defect of an existing method in which the use of a single reference gene can lead to errorsand deviations in experimental results, a more reliable conclusion can be obtained, and the method is of great significance for promoting the improvement and perfecting of molecular biological methods and revealing cell differentiation, development and morphogenesis.
Owner:TOBACCO RES INST CHIN AGRI SCI ACAD

Screening method of reference genes in skin tissue of sheep

The invention discloses a screening method of reference genes in a skin tissue of sheep, which relates to the technical field of biological engineering. The screening method comprises the steps that: a method of the reference genes is confirmed; a given amount of RNA (ribonucleic acid) extract is taken and diluted by 2-10 times by ddH2O (double-distilled water); a 50 nanograms / microlitre RNA sample is taken to serve as a template, and a cDNA (complementary deoxyribonucleic acid) synthetic reagent kit is adopted for conducting inverse transcription to synthesize cDNA; the cDNA synthesized through the inverse transcription serves as a template, and six reference genes serve as primers; and finally, pairing variation analysis of normalized factors Vn / n+1 of the six reference genes are calculated based on a geNorm program, so as to decide the amount of the optimum reference genes. The screening method solves the problem that no screening method for GAPDH (reduced glyceraldehyde-phosphate dehydrogenase) genes in the skin tissue of a Chinese merino (Xinjiang type) serving as the reference genes is not available at present. Through the combination of the specificity of the SYBR Green I with double chain DNA to generate fluorescence, a real-time fluorescent quantitative PCR (polymerase chain reaction) detection method of the SYBR Green I for the GAPDH genes in the skin tissue of the Chinese merino (Sinkiang type) is established.
Owner:新疆维吾尔自治区畜牧科学院畜牧科学研究所

Genetic screening method for negative regulatory factor of streptomyces biosynthesis gene cluster

The invention provides a screening method for a negative regulatory factor of a novel biosynthesis gene cluster of streptomyces. The screening method comprises the following steps: constructing a promoter-mediated reporting system of genes of self-interest in a streptomyces cell, then using a random mutation system based on a transposon Himar1 to mutate the streptomyces with the reporting system,intensively screening a mutant streptomyces strain to obtain a streptomyces strain with high expression of target genes, performing bacteriophage packaging on genomes of the streptomyces strain with high expression of target genes and screening out cosmids with randomly inserted fragments, sequencing DNA of the cosmids to determine the location of the randomly inserted fragments in the genomes ofthe streptomyces strain with high expression of target genes. The screening method, provided by the invention, is stable in screening environment, high in screening flux, low in false positive, high in efficiency, accurate and convenient to operate, and can be widely used in the field of high-yield screening and transformation of industrial streptomyces metabolites, and the screened and transformed streptomyces metabolites are high in yield, good in genetic stability and suitable for industrial production.
Owner:ZHEJIANG UNIV

Screening method for tobacco antiviral regulatory genes and application of screening method

The invention provides a screening method for tobacco antiviral regulatory genes and an application of the screening method. The screening method comprises the following steps: firstly constructing atobacco cDNA library by using a virus-induced gene silencing (VIGS) vector as a target vector, and performing homogenization treatment to obtain a VIGS-cDNA library capable of being directly used forgene silencing screening analysis; transforming VIGS-cDNA library plasmid into agrobacteria to obtain an agrobacterium library; performing spread plate culture on the agrobacterium library to obtain single colonies, performing VIGS silencing analysis on each single colony, and performing screening to obtain antiviral-related colonies; and performing sequencing analysis on genes corresponding to the screened antiviral-related colonies, performing homology analysis on the obtained sequences, and performing function prediction to obtain the antiviral regulatory genes. The method provided by the invention has the advantages of simple operation, no need to construct transgenic plants or mutants, short time consuming, comprehensive screening and high efficiency, is particularly suitable for screening of mutant lethal genes, and has broad application prospects.
Owner:GUIZHOU TOBACCO SCI RES INST

High-throughput functional gene screening method and system for quantitative analysis of cell phenotype images

The invention discloses a high-throughput functional gene screening method and system for quantitative analysis of cell phenotype images, and belongs to the technical field of gene screening. The images of cells with phenotypes to be screened and those without phenotypes to be screened are captured by a fully automatic fluorescence microscope; converted into black and white binary images of phenotypes to be screened and without phenotypes to be screened respectively; and then divided into individual phenotypes to be screened The image of the cell and the image containing a single cell without a phenotype to be screened; the corresponding part of the image containing a single cell with a phenotype to be screened in the image of a cell with a phenotype to be screened is used as a positive training set, which will contain a single cell without a phenotype to be screened The corresponding part of the cell image in the cell image without the phenotype to be screened is used as a negative training set, and the final model that can identify the cell phenotype is obtained; the image of the gene knockout or overexpression cell to be screened is identified by the final model, and the sample to be screened is obtained. Screening for association of genes with phenotypes. The method improves screening efficiency and accuracy.
Owner:HUAZHONG UNIV OF SCI & TECH

Method for screening miR-3880 target gene

The invention discloses a method for screening a miR-3880 target gene. The method comprises the following steps of using a goat genome DNA (deoxyribonucleic acid) as a template, utilizing a primer OGRI to perform amplification by PCR (polymerase chain reaction) under the existence of Taq DNA polymerase, buffer environment, Mg<2+> and dTNPs, and determining an obtained PCR product is a sequence ofa 3'UTR zone of the gene OGR1 (ovarian cancer G protein-coupled receptor 1); constructing a double-luciferase report system, detecting the activity of luciferase, and primarily identifying the miR-3880 target gene; adopting a RT-qPCR (real-time and quantitative polymerase chain reaction) method to detect the influence on the mRNA level of the gene OGR1 by an miR-3880 simulation matter; adopting aWestern blot method to detect the influence on the protein level of the gene OGR1 by the miR-3880 simulation matter. The method has the advantages that the existence of the 3'UTR zone of the gene OGR1and the binding sites of the miR-3880 are defined, the targeting regulating and control relationship between the miR-3880 and the target gene OGR1 is verified, the miR-3880 can be used for inhibitingthe expression of the gene OGR1 on mRNA and protein levels, and the gene OGR1 is further verified to be the miR-3880 target gene; a foundation is laid for the study on the influence on the mammogenesis and lactation functions of dairy goats.
Owner:NORTHWEST A & F UNIV
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