The invention provides an
intracellular mycobacterium tuberculosis in-situ
nucleic acid detection method based on
CRISPR / Cas and application, and the method comprises the following steps: S1, designing crRNA and a primer pair of a
mycobacterium tuberculosis target gene sequence, and synthesizing a single-stranded
DNA fluorescent probe; s2, preparing a
standard solution containing a
target gene sequence, and incubating with a
CRISPR / Cas12a
system; s3, extracting nucleic acids of different types of
bacteria, uniformly mixing the nucleic acids of different types of
bacteria with the
CRISPR / Cas12a
system, and incubating; s4, incubating an
attenuated strain of
mycobacterium tuberculosis and the
DNA fluorescent probe, infecting macrophages, and incubating to obtain infected cells; s5, electrically transferring a CRISPR / Cas12a
system into the infected cells in S4 by utilizing an
electroporation technology, incubating, and detecting the intensity of a
fluorescence signal; and S6, performing quantitative and positioning analysis on the detected
fluorescence signal to complete detection, and directly introducing a CRISPR / Cas12a system into the macrophage by adopting an
electroporation technology to realize
intracellular in-situ detection, thereby avoiding the operation complexity of a
nucleic acid extraction link and the loss of detection sensitivity in the prior art.