43 results about "Organism Strain" patented technology

Platforms, systems, and methods for genetic generalization in synthetic biology development. According to one aspect, there is provided a method for predicting performance associated with genetic edits, the method comprising: receiving, by a platform, information about a strain of a microorganism, wherein the information about the strain comprises information describing a plurality of genetic edits to a base strain of the microorganism; generating, by the platform, a set of genetic embeddings based on the information about the strain, wherein the generating comprises processing the information about the strain using one or more embedding models, wherein each of the one or more embedding models: receives the information about the strain of the microorganism as input; and applies computational transformations to the input using a corresponding embedding model to generate a multi-dimensional vector representation for each of the plurality of genetic edits.

The invention belongs to the technical field of microbial genetic engineering, and particularly relates to an alpha-2, 3-sialyltransferase mutant and application thereof. The a-2, 3-sialyltransferase mutants V175N, P198A, G173D, D174Q, F196K and A315H are obtained by performing site-specific mutagenesis on six amino acids in an a-2, 3-sialyltransferase amino acid sequence coded by a gene derived from Campylobacter jejuni (OH4384), the yield of 3 '-sialyllactose is remarkably increased by single-point mutagenesis of the V175N, the yield of 3'-sialyllactose is remarkably increased by single-point mutagenesis of the V175N, the yield of 3 '-sialyllactose is remarkably increased by single-point mutagenesis of the P198A, the G173D, the D174Q, the F196K and the A315H, the optimal recombinant microbial strain 3 '-SL-09 (V175N / P198A / D174Q) is obtained through combination of multiple mutation sites, the yield can reach 5.91 g / L, the bottleneck problem of low catalytic efficiency of sialyltransferase is effectively solved, and an enzyme element with excellent performance is provided for high-efficiency and low-cost biological manufacturing of 3'-SL.

The invention belongs to the field of membrane pollution control, and particularly relates to pseudomonas as well as a separation method and application thereof. The invention provides a pseudomonas, which is identified as Pseudomonas knackmussii HITSZ-Q1, is preserved in the Guangdong Microbiological Culture Collection Center, and has the preservation number of GDMCC (China General Microbiological Culture Collection Center) NO: 66162. The strain takes C6-HSL as the unique carbon source and nitrogen source, and the 16S rDNA sequence of the strain is as shown in SEQ ID NO. 1. The strain has a remarkable degradation capability on signal molecules such as C6-HSL, C8-HSL, 3-oxo-C12-HSL and the like, and the highest quenching rate can reach 98.9%. The strain and pseudomonas aeruginosa are co-cultured, so that the signal molecule concentration of the pseudomonas aeruginosa can be effectively reduced, and biofilm formation is inhibited. The strain is further prepared into a carrier in the form of immobilized pellets, the carrier is added into a membrane bioreactor, the operation cycle is prolonged from 6.5 days to 10.5 days, and the membrane pollution delay rate reaches up to 61.5%.

The present invention belongs to the field of resources and environment, and discloses a method for promoting chalcopyrite bioleaching by in-situ depassivation: in an anaerobic environment, passivated chalcopyrite and reduced sulfur are added to a 9K culture medium, an acidophilic microbial strain is inoculated for culture, and the chalcopyrite is collected by centrifugation; the collected chalcopyrite is dried and added to a 9K culture medium, and the acidophilic microbial strain is inoculated for culture and leaching under an aerobic environment. The present invention introduces acidophilic microorganisms and sulfur into the anaerobic system, so that the dense passivation film of the chalcopyrite can be reduced and removed, allowing the copper ions in the mineral to be leached under aerobic conditions in the later stage. This not only overcomes the shortcomings of pure chemical reaction leaching, such as high energy consumption, high consumables, and environmental pollution, but also solves the problem of low utilization efficiency due to the passivation film hindering leaching during the bioleaching process, so that the chalcopyrite can be utilized to the greatest extent. This in-situ depassivation bioleaching technology has a wide range of applications, low site requirements, and can be used on a large scale industrially.

The invention belongs to the technical field of microbial genetic engineering, and particularly relates to an alpha-2, 6-sialyltransferase mutant and application thereof. The a-2, 6-sialyltransferase mutants M133L, E140D, D228H, N289D and G322Q are obtained by carrying out site-specific mutagenesis on five amino acids in an a-2, 6-sialyltransferase amino acid sequence coded by a gene derived from Photobacterium sp.JT-ISH-224, and compared with wild type alpha-2, 6-sialyltransferase, the yield of the single-point mutant 6 '-SL of the E140D and the yield of the single-point mutant 6'-SL of the G322Q are increased by 87.80% and 78.01% respectively. The yield of the optimal recombinant microbial strain 6 '-SL-7 (E140D / G322Q) obtained by mutation site combination can reach 1.471 g / L, the bottleneck problem of low catalytic efficiency of sialyltransferase is effectively solved, and an enzyme element with excellent performance is provided for high-efficiency and low-cost biological manufacturing of 6'-SL.

The invention discloses a strain of Bacteroides ovatus L2 and application of the strain of Bacteroides ovatus L2 in a product for preventing and treating vomitoxin toxicity. The strain is preserved in Guangdong Microbiological Culture Collection Center, the preservation number is GDMCC.No: 67205, and the preservation date is November 4, 2025. The strain is separated and purified from a healthy adult excrement sample, has the characteristics of good acid resistance, cholate resistance, gastrointestinal fluid resistance and the like, and is free of hemolysis and good in safety. The strain can effectively relieve the toxic effect induced by vomitoxin, mainly inhibits inflammatory factors and promotes expression of intestinal barrier functional proteins, can be applied to products of microecologics for preventing and treating DON toxicity, and has a good application prospect.

This invention relates to a method for efficiently spraying soil conditioner to treat saline-alkali land using composite microorganisms, belonging to the field of soil improvement technology. The method involves screening salt-tolerant functional microbial strains to prepare a composite microbial agent, which is then mixed with carrier materials such as diatomaceous earth, soybean meal, yeast metabolites, and well-rotted farmyard manure in a specific ratio to form a conditioner for application. The conditioner is applied using a two-stage spraying method, combined with deep tillage pretreatment and controlled temperature and humidity conditions, significantly improving microbial activity and soil condition uniformity. Experimental data show that after applying this method, the soil pH value decreased to 7.3-7.5, the salt content decreased to 0.1%-0.2%, and the organic matter content increased to 18-22 g / kg, achieving efficient ecological restoration and sustainable utilization of saline-alkali land.

This application relates to the field of microbial strain technology, specifically disclosing a Bacillus thuringiensis HP-SYJ2 strain and its applications. The Bacillus thuringiensis HP-SYJ2 strain is deposited at the China Center for Type Culture Collection (CCTCC), accession number: CCTCC NO: M2025343, deposit date: March 3, 2025, address: Wuhan University, Wuhan, China. The strain of this application can be used to prepare insecticides for controlling underground pests, which is of great significance for the biological control of plant diseases and pests.

The application relates to the technical field of microbial strain preservation, in particular to a microbial strain preservation device which comprises a freezer, a moving assembly and a rotating assembly, the freezer is provided with a box door, a fixing seat is arranged in the freezer, the end of the fixing seat is provided with a supporting disc, a plurality of groups of test tube racks are fixedly connected to the supporting disc, and the bottom end of the supporting plate is fixedly connected with a connecting shaft; the moving assembly is arranged in the freezer and is used for driving the supporting disc to displace; and the rotating assembly is used for driving the connecting shaft to rotate, so that the supporting disc rotates. The moving assembly and the rotating assembly are arranged, the connecting shaft drives the supporting plate to move a small distance through the action of the moving assembly, part of the position of the supporting disc is moved to the outside of the freezer, then the connecting shaft drives the supporting disc to rotate through the cooperation of the rotating assembly, and then the strain at any position on the supporting plate can be taken and placed, so that the operation is more convenient.

Genetically engineered yeast cells having disruption of pex3, pex5 or pex20 genes and combinations thereof having reduced beta-oxidation and methods for increasing polyunsaturated fatty acids are disclosed.

The invention relates to a recombinant microbial strain for de novo synthesis of gardenin B and application of the recombinant microbial strain in production of polymethoxylated flavone compounds, and belongs to a cross technology of synthetic biology and organic synthetic chemistry. The invention designs and constructs a heterozygous gardenin B biosynthesis pathway, and obtains a microbial strain for synthesizing gardenin B from the beginning. By screening F8H and redox partner types and regulating and controlling subcellular localization, an F8H-redox partner combination with optimal space and type is determined, and an engineering strain of which the gardenin B yield is greatly improved is obtained. The efficient synthesis method of the polymethoxylated flavonoids is established by selecting recombinant microorganisms for synthesizing gardenin B from de novo to perform co-culture fermentation or chemical conversion of fermentation products.

The invention relates to a microbial strain DNA (deoxyribonucleic acid) mixed coding and an alternating Transformer depth prediction method for gene expression of the microbial strain DNA mixed coding, and belongs to the crossing field of bioinformatics and artificial intelligence. The core of the method is to construct a deep learning model capable of efficiently capturing DNA sequence characteristics, and end-to-end accurate prediction of the expression level of a target gene in a specific microbial host is realized. The method comprises the following steps: carrying out binary coding on four conventional basic groups of DNA of a target strain, splicing eight key biological characteristics closely related to gene expression, and carrying out hybrid coding to generate a combined characteristic matrix; a deep learning network containing an alternating Transform coding structure is established, local structure information of a DNA combination feature matrix and a global context dependency relationship are deeply fused, and the analysis precision of microorganism DNA sequence data and the prediction accuracy of a gene expression level are improved. According to the technical scheme, an efficient and accurate computer-aided prediction tool is provided for optimization design of genetic elements (such as promoters) and gene sequences, the expensive experiment trial and error cost and the strain characterization cost can be remarkably reduced, and the research and development process of high-yield strains is accelerated.

The present invention belongs to the field of microbial technology, and particularly relates to a phosphate-solubilizing Aspergillus terreus and its application in drought-resistant probiotics; the Aspergillus terreus of the present invention is obtained by screening the rhizosphere soil of pepper, and the Aspergillus terreus CY-05 ( Aspergillus terreus var. fluffy ) is a growth-promoting microbial strain with disease resistance, high yield of terreus ketone and phosphate solubilization ability, and is an excellent strain with strong survival ability and multiple functions such as improving crop drought tolerance. The present invention also provides a probiotic agent obtained by solid-state fermentation of Aspergillus terreus CY-05. The application of this agent can increase the tolerance of crops to drought, improve the yield and survival ability of crops under drought stress conditions, promote the conversion and utilization of insoluble phosphorus, and prevent and control the occurrence of root soil-borne diseases. Strain CY-05 is an indigenous fungus in the rhizosphere of pepper. It is non-toxic and harmless to humans and animals, does not cause environmental pollution, and helps to solve the problems of water shortage and phosphorus deficiency faced by agricultural production in large semi-arid planting areas. It has important economic significance.

Various embodiments of the present specification relate to a method of optimizing a combination of microbial strains and predicting the growth status of the strains. A method for identifying a microbial strain combination according to one embodiment of the present specification for achieving the above-described technical problem may comprise a step for obtaining genome analysis information relating to a target microorganism; a step of obtaining first metabolic information relating to each of a plurality of first microorganism colonies including the target microorganism; a step of estimating first growth index information relating to each of the plurality of first microbial colonies by using the genome analysis information and the metabolism information as inputs of a first model; and a step of determining a strain combination on the basis of at least one of the metabolism information and the growth index information.

The application discloses a coal gangue microbial active substrate for planting and a preparation method thereof. The application can dissociate effective mineral elements in coal gangue through the decomposition and activation of microorganisms, and can form a microbial substrate for planting by cooperating with added biogenic solid waste such as biogas residue, coconut husk, poultry manure and vinegar residue. The prepared microbial substrate contains active microbial strains which can continuously decompose and activate coal gangue, and can continuously release mineral elements necessary for plant growth, and can decompose organic matters in biogenic solid waste. Through the added biogenic solid waste, a certain particle size, loose and breathable physical structure and stable physicochemical properties are formed, and the physical structure can stably provide nutrient elements and organic matters for plants in the plant growth period. The microbial active substrate prepared by using the application can slowly provide necessary nutrient substances for plants in the cultivation period, and can better promote plant growth.

The present invention provides a terpenoid biosynthetic gene cluster, its expression cassette, expression vector, and recombinant microbial strain. The terpenoid biosynthetic gene cluster comprises at least one of a sesquiterpenoid and a diterpenoid. The terpenoid biosynthetic gene cluster comprises four gene clusters, and a plasmid library and a strain library containing functional genes from the gene clusters are obtained. The present invention ferments and tests the obtained strain library to obtain a product library including 36 terpenoid compounds. Furthermore, the present invention identifies the structures of four terpenoid compounds through product purification and NMR analysis. The terpenoid gene clusters screened by the present invention are capable of producing sesquiterpenoid and diterpenoid compounds, enriching the variety and library capacity of terpenoid natural products.

The present invention discloses a method, an identification device, and related equipment for microbial identification, and relates to the technical field of microbial strain identification. The method for microbial identification provided by the present invention has high resolution for microbial strain identification, and can accurately identify and differentiate strains with high similarity, thereby achieving accurate identification of strains at the same level during target strain screening to obtain strains with the same target function. The provision of the method of the present invention helps to shorten the development cycle and improve the accuracy and effectiveness of functional strain screening in the process of screening microbial strains for functional strains in medicine, food, animal or plant microbiomes, environmental treatment, and agriculture. In addition, the method of the present invention can also effectively identify new species at the same time.

The application discloses a kind of fluorine-resistant trichoderma asperellum and the fungicide prepared by it, belong to microbial strain and application technical field.The strain is named Trichoderma asperellum M700, has been preserved in China typical culture preservation center (CCTC), and its preservation number is CCTCC NO: M 2024579, and the preservation date is March 27, 2024.The beneficial effect: the trichoderma asperellum strain of the application Trichoderma asperellum. Colony growth early stage presents white mycelium, later generation green spore, causes the body to present yellow green, green, aerobic, can survive at ph 3.0-10.0, temperature is 25-28 DEG C.The strain has very good resistance, and can grow when the fluorine ion concentration is below 800 mg / L.Can very good dispel fluorine element in water body.

Provided are a microbial strain of Lachnospiraceae, a drug for preventing and / or treating at least one of tumors, metabolic diseases, diabetes, autoimmune diseases, infectious diseases, central nervous system diseases and inflammatory bowel diseases, and the use. The microbial strain of Lachnospiraceae is a new genus and species (Lachnospiraceae sp.) of the Lachnospiraceae, the nucleotide sequence of 16S rDNA is as shown in SEQ ID No. 1, and the microbial strain of the Lachnospiraceae can inhibit the growth rate of tumors and can be used for the prevention and / or treatment of tumors. The tumors include at least one of the following: liver cancer, colon cancer, rectal cancer, colorectal cancer, lung cancer, breast cancer, cervical cancer, ovarian cancer, pancreatic cancer, bile duct cancer, renal cancer and fibrosarcoma.

The invention belongs to the technical field of microorganisms, and particularly relates to saccharomyces boulardii BHS09, a microbial agent and application of the saccharomyces boulardii BHS09 in agriculture. The preservation number of the bacterial strain BHS09 provided by the invention is GDMCC (Graphite December for March Center) No. 66542. The strain has high phosphorus dissolving capacity and potassium dissolving capacity, and the potassium dissolving rate is 46.83%; the capacity of high-yield IAA is achieved, and the yield reaches 24 mg / L; the inhibition rates of the volatile gas to curvularia maize, fusarium moniliforme, fusarium pseudograminearum and fusarium oxysporum are respectively 11.64%, 54.82%, 46.48% and 51.80%, and the inhibition rates of the volatile gas to rhizoctonia solani, fusarium verticillium, curvularia maize, fusarium moniliforme, fusarium pseudograminearum, fusarium graminearum, phytophthora nicotianae and fusarium oxysporum are 40.05%-76.02%; the strain has an obvious growth promoting effect on wheat, and provides a strain resource for excavation of composite microbial strains with multiple functions.

The utility model provides microbial strain separation equipment, which relates to the technical field of separation equipment, and comprises a protective shell, a test tube body and a rubber plug, and the inner surface of the protective shell is provided with a slot. The pull rod is pulled to drive the connecting column to slide in the fixing ring, the connecting column can drive the limiting block to slide in the limiting hole in the sliding process, the limiting block can compress the reset spring towards the position where the fixing ring is located in the sliding process, and the limiting block can relieve limitation on the inserting plate after being compressed to a certain degree; the test tube body is inserted into the protective shell after being removed, the insertion plate at the bottom of the test tube body is inserted into the insertion groove in the protective shell after being inserted by a limit distance, the pull rod is loosened after being inserted, and the limiting block is bounced into the limiting hole through resilience force of the reset spring after being loosened; according to the design, the test tube body is limited in the protective shell, so that the storage safety of the test tube body is improved, and the test tube body is effectively prevented from being easily impacted and broken by foreign objects in the storage process.

The invention relates to the technical field of bacterial culture, in particular to biological strain culture equipment in sewage treatment, which comprises a culture box, and a box body sealing door is movably mounted on the culture box; the U-shaped object bearing frame is fixedly arranged in the culture box; the bearing tray is placed on the U-shaped bearing frame and is used for bearing a biological strain culture medium; the tray body convenient and fast fixing assembly is installed on the U-shaped bearing frame, and the bearing tray is fixed to the U-shaped bearing frame through the tray body convenient and fast fixing assembly; a stable contact strip and a right-angle locking frame are arranged in the incubator, when a bearing plate is placed, the bearing plate can be quickly and automatically locked, so that manual fixing operation of the bearing plate is not needed, when the bearing plate needs to be taken out, the bearing plate can be in an unlocked state only by pushing a driving bearing plate downwards, and the operation is convenient. And quick taking out of the container is facilitated.

The present invention provides a microbial strain storage box, which relates to the field of medical devices and includes: a storage body, a storage inclined plate, a retrieval slot, a placement slot, a retrieval control door, a retrieval shaft, a strain storage mechanism, and a strain retrieval mechanism; the retrieval slot is provided on the front end face of the storage body; the placement slot is provided on the front end face of the storage body; the storage inclined plate is fixedly connected to the inside of the retrieval slot; the retrieval shaft is rotatably connected to the inside of the storage body; the retrieval control door is fixedly connected to the retrieval shaft; the strain storage mechanism is provided inside the storage body; and the strain retrieval mechanism is provided inside the storage body. By adopting the strain storage mechanism, the problem of cold air loss caused by placing microbial strains is avoided. By adopting the strain retrieval mechanism, it is convenient for staff to uniformly retrieve strains, and the problem of staff repeatedly opening the glass door to retrieve and place microbial strains, which continuously affects the temperature inside the storage box, is solved.

The invention relates to direct-fed microbials for use in E. coli and / or Clostridium inhibition in animals in combination with antibiotics. More particularly, the invention relates to isolated Bacillus strains 2, 3, 4, 5, 6, 7, 9, 57, 71, and 126, and strains having all of the identifying characteristics of these strains, for a use comprising the above-mentioned use.

The invention discloses a composite flora for improving water quality of ecological aquaculture and aquatic product quality as well as a preparation method and a use method of the composite flora, and belongs to the technical field of microbial agents. The composite flora is composed of three modular flora bodies composed of multiple functional microbial strains, the three modular flora bodies are formed through a specific synergistic matching technology, the composite flora can be applied in a single water body splashing mode, and an innovative in-situ biological flocculation delivery synergistic technology is applied. According to the composite flora, the technical idea of'in-situ biological flocculation delivery 'is proposed and realized, that is, exopolysaccharide is secreted through the flora of the module I to construct a biological flocculation carrier, probiotics of the module III are embedded, and efficient colonization of intestinal tracts is realized through ingestion of a host. The synergistic water purification mechanism of substrate relay and the synergistic antibacterial mechanism of environmental modification and multi-target attack serve as the basis of efficient operation of the system.

Microbial starter cultures. More specifically, a method for preparing a microbial culture such as a lactic acid bacteria (LAB) starter culture wherein at least one microbial strain such as a lactic acid bacteria and at least one inactivated yeast strain is inoculated in a culture medium.

This invention belongs to the field of microbial fermentation technology, specifically relating to a new strain of Pichia pastoris (Kudelazwiel). Pichia Kudryavzevii ) and its applications. To stabilize and target the production of ethyl acetate in baijiu (Chinese liquor), this invention screens, isolates, and identifies a strain of *Pichia pastoris* capable of high ethyl acetate production from soy sauce-flavored baijiu mash. Pichia kudriavzevii LJ-5, with accession number CCTCC NO:M20252599, is a strain that enhances the fermentation of lees. In baijiu brewing, it can be used to produce ethyl acetate, ethyl lactate, and other flavor compounds, especially significantly increasing the content of ethyl acetate produced during fermentation. Therefore, this strain can be applied to baijiu production as a functional microbial strain to improve baijiu quality.

The application discloses a Sphingobium yanoikuyae and application thereof in decomposing ascr#18. The Sphingobium yanoikuyae 25D is preserved in the Guangdong Microbial Culture Collection Center (GDMCC) on May 10, 2023, and the address of the GDMCC is the 5th floor of the building 59, the courtyard 100, the Middle of the Martyrs, Guangzhou, the postal code of the Guangdong Academy of Microbiology is 510070, and the preservation number is GDMCC No: 63454. It is found for the first time that the Sphingobium yanoikuyae 25D is a southern root-knot nematode accompanying bacterium and has the function of decomposing ascr#18.

The present disclosure provides a method for designing microbial consortia for fermentation to approximate a targeted organoleptic profile of a fermented outcome by training and applying a machine learning model using microbial-substrate interaction data under various fermentation parameters. The model, by taking fermentation parameters predicts metabolites produced by combinations of the candidate microbial strains with candidate substrates under various fermentation parameters and selects at least one microbial strain, substrate, and fermentation parameter for the microbial consortia. The present disclosure also provides a method for predicting an organoleptic profile of a fermented outcome based on the inputs of fermentation parameters, microbial strains, and substrates.

A method for treating a microbial infection in a subject is provided that includes administering to the subject a composition including a therapeutically effective amount of at least one microbial strain adapted to perform a competitive Stickland fermentation or provide a pathway or mechanism of proline utilization or depletion. Also provided is a composition for use in treating a microbial infection, a synthetic microbiota or synthetic microbiota transplant including such composition, the use of such composition in the manufacture of a medicament for treating a microbial infection, and a medical kit for treating a microbial infection including the synthetic microbiota transplant and an instruction for use thereof.