A non-naturally occurring microbial 
organism has 
cyclohexanone pathways that include at least one exogenous 
nucleic acid encoding a 
cyclohexanone pathway 
enzyme. A pathway includes a 2-ketocyclohexane-1-carboxyl-CoA 
hydrolase (acting on C—C bond), a 2-ketocyclohexane-1-
carboxylate decarboxylase and an 
enzyme selected from a 2-ketocyclohexane-1-carboxyl-CoA 
hydrolase (acting on 
thioester), a 2-ketocyclohexane-1-carboxyl-
CoA transferase, and a 2-ketocyclohexane-1-carboxyl-CoA synthetase. A pathway includes an 
enzyme selected from a 6-ketocyclohex-1-ene-1-carboxyl-CoA 
hydrolase (acting on C—C bond), a 6-ketocyclohex-1-ene-1-carboxyl-CoA synthetase, a 6-ketocyclohex-1-ene-1-carboxyl-CoA hydrolase (acting on 
thioester), a 6-ketocyclohex-1-ene-1-carboxyl-
CoA transferase, a 6-ketocyclohex-1-ene-1-carboxyl-CoA 
reductase, a 6-ketocyclohex-1-ene-1-
carboxylate decarboxylase, a 6-ketocyclohex-1-ene-1-
carboxylate reductase, a 2-ketocyclohexane-1-carboxyl-CoA synthetase, a 2-ketocyclohexane-1-carboxyl-
CoA transferase, a 2-ketocyclohexane-1-carboxyl-CoA hydrolase (acting on 
thioester), a 2-ketocyclohexane-1-carboxylate decarboxylase, and a 
cyclohexanone dehydrogenase. A pathway includes an 
adipate semialdehyde 
dehydratase, a 
cyclohexane-1,2-
diol dehydrogenase, and a 
cyclohexane-1,2-
diol dehydratase. A pathway includes a 3-oxopimelate decarboxylase, a 4-acetylbutyrate 
dehydratase, a 3-hydroxycyclohexanone 
dehydrogenase, a 2-
cyclohexenone hydratase, a cyclohexanone dehydrogenase and an enzyme selected from a 3-oxopimeloyl-CoA synthetase, a 3-oxopimeloyl-CoA hydrolase (acting on thioester), and a 3-oxopimeloyl-
coA transferase. Each these pathways can include a PEP carboxykinase. A method for producing cyclohexanone includes culturing these non-naturally occurring microbial organisms.