The invention relates to fertilizer pesticide, and specifically relates to an organic fertilizer fermenting agent and a preparation method thereof. The fermenting agent is composed of bacillus subtilis, bacillus mucilaginosus, trichoderma viride, lactococcus lactis, actinomycetes, azotobacter chroococcum, bacillus megatherium, bacillus mucilaginosus, escherichia coli, active ingredient, cellulose, protease and phosphorylase. The preparation method of the fermenting agent comprises the following steps: 1, weighing each constituent; 2, preparing a mixture I; 3, preparing a mixture II; 4, smashing. According to the invention, active ingredient is added into the fermenting agent, so that effective viable count content in the fermenting agent is improved greatly, heating and fermenting time is reduced, and absorption and utilization rates of the fermenting agent by poultry dung, straw, and the like, are improved. Aspergillus niger in the active ingredient is uniformly stirred with other constituents after being stirred well with orangeade, thus, absorption and utilization of the organics in the active ingredient by various microbes in the fermenting agent are promoted greatly, and the increase of effective viable count in the fermenting agent is facilitated.