The invention relates to a low-temperature-resistant methanogen enrichment culture method and an application thereof. The low-temperature-resistant methanogen enrichment culture method comprises the following steps: firstly, taking activated sludge, breaking into pieces, inoculating into an enrichment culture medium, and determining enrichment culture temperature at the temperature of 15-25 DEG C according to sources of inocula; and secondly, when bubbles are detected in a culture system, gradually lowering temperature by virtue of a temperature control system, and stopping temperature lowering until no bubble is detected, so that low-temperature-resistant methanogen enrichment culture is completed. An application mode comprises that enrichment culture products are added into an accelerator prepared from ferric chloride, cobalt chloride, nickel chloride and manganese chloride and the obtained mixture is directly applied to low temperature methane fermentation. The low-temperature-resistant methanogen enrichment culture method can be used for solving the problems that preparation steps of an existing low temperature methanogen agent are tedious, low temperature domestication time is long and status of dominant bacteria is difficultly maintained for a long time at a low temperature. The low-temperature-resistant methanogen enrichment culture method is simple and easy to operate, has the advantages of short enrichment time, stable performance, good and stable running effect, available flora source and the like and is convenient for popularization and application.