The invention belongs to the technical field of water dispersible fluorine silicone modified acrylic resin coating, and discloses water dispersible fluorine silicone modified acrylic resin coating and preparation method thereof and an application in an aluminum profile. The coating comprises black primer and varnish, and the preparation method includes the following steps that carbon black, water and a dispersing agent are mixed and dispersed to obtain black wash; water dispersible fluorine silicone modified acrylic resin is mixed with amino resin, naphthalene sulfonic acid catalyzer is added, after mixture is stirred evenly, the water, talcum powder and the black wash are added to disperse and filtrate, the black primer is obtained; the water dispersible fluorine silicone modified acrylic resin is mixed with the amino resin, the naphthalene sulfonic acid catalyzer and flatting agent are added, after the mixture is stirred evenly, the water, a defoaming agent, propylene glycol monomethyl ether and ethyl alcohol are added to disperse and filtrate, and the varnish is obtained. Double coating water-based paint is formed by the coating, the coating has decorative effects that the color is rich, the feeling of metal is strong and the gloss is high, the weather ability is excellent, green and environmental protection are achieved, the cost is low, and the coating can be applied to aluminum profile coating.