The invention relates to the technical field of nano device preparation, in particular to a magnetotactic nano motor and a preparation method thereof. Precious metal nano particles are used as a basic framework of the motor, one side is connected with functional molecules, and the other side is connected with magnetic nano particles. The magnetotactic nano motor is small in size, good in biocompatibility, high in catalytic activity, high in sensitivity, good in motion performance and controllable in motion direction, has wide application prospects in the fields of sensing and environmental protection, has excellent performance in the fields of biosensing and disease treatment due to the special optical and electrical properties of the precious metal nanoparticles, and can be applied to the fields of biosensing and disease treatment. Due to the mechanical property of the magnetic nanoparticles, the magnetic nanoparticles have excellent performance in direction control. According to the preparation method, the controllability is high, the sizes of the precious metal nanoparticles and the magnetic nanoparticles are adjustable, accurate regulation and control of the particle size of the magnetotactic nano motor can be achieved, and the requirements of different applications and preparation of nano motors of different sizes and different materials are met.