The invention discloses a composite soil conditioner for treating heavy metal Cd pollution, and preparation and use methods thereof. The composite soil conditioner comprises the composition and content: 20-30% of clay minerals, 10-20% of peat, 10-20% of biochar, 25-35% of slaked lime, 5-15% of an oxide of iron, and 5-10% of a microbial agent. The preparation of the composite soil conditioner comprises the following steps: adding the clay minerals, the peat, the biochar, the slaked lime and the oxide of iron in proportion, then fully stirring until the raw materials are evenly mixed; adding the microbial agent with the amount of 5-10%, to prepare an inorganic and organic composite conditioner, wherein the microbial agent contains at least one of iron-reducing bacteria, photosynthetic bacteria and bacillus. The composite soil conditioner prepared by the method is directly added to crop field soil polluted by heavy metals in proportion, and then ploughed fallowing is performed. Compared with the prior art, the product has the advantages of ingenious and reasonable formula design, excellent in-situ passivation effect, simple preparation method, low production cost, simple application method and the like.