The invention provides a staggered type cyclopean wall imitated natural channel and belongs to the field of water conservancy projects. The staggered type cyclopean wall imitated natural channel comprises a concrete base, bank slopes, vertical seams, long cyclopean walls, short cyclopean walls, field building stones, a bottom slope, bottom slope boulders and a cyclopean sill. According to the imitated natural channel, the long cyclopean walls and the short cyclopean walls are arranged in the channel in a staggered mode to divide the imitated natural channel into a plurality of pools, and the vertical seams are reserved between the long and short cyclopean walls from side to side. The field building stones are laid on the concrete base to form the bank slopes, the bottom slope boulders are laid on the concrete base to form the sloping bottom slope, and the cyclopean sill is constructed at the bottoms of the vertical seams. According to the staggered type cyclopean wall imitated natural channel, the energy dissipation structure of traditional technical fish ways is optimized, and an eco-friendly migration channel is created for fishes; the manufacturing cost is low, the channel is suitable for large water level variation amplitude, the variety of passing fishes is large, and natural river ecological environment can be simulated; the staggered type cyclopean wall imitated natural channel is easy to rebuild after being constructed and is an ecological compensation project high in adaptability.