The invention discloses a method for preparing jujube and seabuckthorn ice wine, and relates to functional ice wine. The method comprises the following steps of: crushing and pulping fresh jujube, performing color protection and enzymolysis, performing alcoholic fermentation by using active dry yeast as distiller's yeast, ageing, picking seabuckthorn at the temperature of below minus 7 DEG C, squeezing to obtain seabuckthorn juice, adding the juice into the jujube wine in a certain volume ratio, and performing low-temperature fermentation, thus obtaining the ice wine with unique flavor and health-care effect. The process flow comprises picking, cleaning, crushing, color protection, enzymolysis, juicing, inoculation, fermentation, wine pouring, fining, filtration, ageing, blending, cold and heat treatment, filtration, fine filtration, storage, sterilization and filling. According to the method, pure juice is used for complete raw juice fermentation, the alcoholic strength of the produced jujube and seabuckthorn ice wine is about 10 degrees, and the sugar degree reaches 100g/L; the health-care wine has rich nutrition, and does not contain any artificially synthesized pigment, essence or sweetening agent; the adopted raw materials are special fruits with rich resources, wide distribution and high nutrition; and the method can be used for realizing large-scale industrialized production.