The invention discloses a method used for rapidly determining that whether hydrogen concentration of water samples is as large as an effective concentration, and belongs to the field of enzymatic analysis of biotechnology. According to the method, acetylcholine esterase, acetylthiocholine, a reaction buffer system reagent, and color developing agent DTNB are mixed uniformly, an obtained mixture is divided into two equal parts; hydrogen water to be tested is added into a first part of the mixture, and deionized water is added into a second part of the mixture, wherein adding amount of the hydrogen water is equal to that of the deionized water, and pH values of obtained solutions are both 7; and after reaction, hydrogen content can be determined by comparing absorbance values at visible light 412nm of the solutions, or based on the shade of the colour of yellow products, wherein the larger the absorbance value of the first part is than that of the second part, or the heavier the colour of a product of the first part is than that of a product of the second part, the higher the hydrogen content is. According to the method, hydrogen content of water can be determined directly via color development reaction of enzymatic determination.